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Configuration for Plancton on OCCAM

The BWA v0.7.17 read mapper, build from bioconda

Dockerfile etc. per Rosalba Ignaccolo

Repository to store every tool needed to setup a use case running natively on bare metal for bioinformatics. This repository is meant to be temporary, until there will be implemented new logics and interfaces.

Example scripts useful to submit MPI jobs to the virtual farm.

openjdk:8 based release of CANU, a PacBio assembler